The detailed information of tRNA gene sequence


Sequence ID>SRA1005167
Genome IDSRR006907.77257
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 175
End posion on genome 100
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tgcggagttt
tRNA gene sequence 
GCCCATGTAGCTCAGTTGGTAGAGCACGTCCTTGGTAAGGACGAGGTCACCGGTTCAATC
CCGGTCATGGGCTCCA
Downstream region at tRNA end position 
gccgcgcgcg
Secondary structure (Cloverleaf model)
>SRA1005167	Thr	GGT
                   t      TCCA gccgcgcgcg
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A
                     G - C          C T
                    T     T G G C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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