The detailed information of tRNA gene sequence


Sequence ID>SRA1005213
Genome IDSRR006907.111453
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 99
End posion on genome 171
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gggtcaacag
tRNA gene sequence 
GGGCACGTAGCATAATGGATAATGCATCAACCTTCTAAGTTGCCGATTGCTGGTTCGAGT
CCAGCCGTGCCTGttg
Downstream region at tRNA end position 
aagcataatg
Secondary structure (Cloverleaf model)
>SRA1005213	Arg	TCT
                   g      Gttg aagcataatg
                     G + T
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G
                     G - C          T G
                    T     C G A C C     A
      T A A        A      | | | | |     G
    G       T A C G       G C T G G     C
    G       | | | |                 T T
    A       A T G C
      T A          A     CGATT
                    T   C
                    C - G
                    A - T
                    A - T
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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