The detailed information of tRNA gene sequence


Sequence ID>SRA1005216
Genome IDSRR006907.112863
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 219
End posion on genome 145
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cgcctttttt
tRNA gene sequence 
GGGGGATTAGTGCTAATGGGAACACGCTGCGTTTGCATCGCAGAGTTGAGAGTTCGATTC
TCTCATCCTCCACCA
Downstream region at tRNA end position 
aaatatgccc
Secondary structure (Cloverleaf model)
>SRA1005216	Ala	TGC
                   t      ACCA aaatatgccc
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     T - A          T T
                    T     C T C T C     A
      A A T        A      | | | | |     G
    T       C G T G       G A G A G     C
    G         | | |                 T T
    G       A C A C
      G A          G     AGTT
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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