The detailed information of tRNA gene sequence


Sequence ID>SRA1005257
Genome IDSRR006907.135835
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 166
End posion on genome 239
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cactaattat
tRNA gene sequence 
AGCGGGTTAGAGTAGTGGTCACTCGAAGGTCTCATAAGCCTTACAGGTTGGTTCGATTCC
AGCACCCGCAACCT
Downstream region at tRNA end position 
atttttttaa
Secondary structure (Cloverleaf model)
>SRA1005257	Met	CAT
                   t      ACCT atttttttaa
                     A   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A          T T
                    T     C G A C C     A
        G A        A      | + | | |     G
      T     T G A G       G T T G G     C
      G     | | | |                 T T
      G     A C T C
        T C        G     ACAG
                    A - T
                    A - T
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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