The detailed information of tRNA gene sequence


Sequence ID>SRA1005263
Genome IDSRR006907.138225
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 75
End posion on genome 147
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
acccgccatt
tRNA gene sequence 
GGCCCCATAGTTAAATGGATATAACAAGTGCCTTCTAAGCACTGATTAGAGGTTCGATTC
CTCTTGGGGCTACtt
Downstream region at tRNA end position 
gacaacgctg
Secondary structure (Cloverleaf model)
>SRA1005263	Arg	TCT
                   t      ACtt gacaacgctg
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     T C T C C     A
      T A A        A      | | | | |     G
    G       A T T G       A G A G G     C
    G       | | | |                 T T
    A       T A A C
      T A          A     GATT
                    A - T
                    G - C
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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