The detailed information of tRNA gene sequence


Sequence ID>SRA1005279
Genome IDSRR006907.150643
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 154
End posion on genome 79
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tcccgtgagt
tRNA gene sequence 
GCCGATTTAGCTCAGCTGGTAGAGCAACTGATTTGTAATCAGTAGGTCGGAGGTTCGAAT
CCCTCAATCGGCACCA
Downstream region at tRNA end position 
ttcttttcaa
Secondary structure (Cloverleaf model)
>SRA1005279	Thr	TGT
                   t      ACCA ttcttttcaa
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     T - A          T A
                    T     C T C C C     A
      C G A        A      | +   | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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