The detailed information of tRNA gene sequence


Sequence ID>SRA1005280
Genome IDSRR006907.151499
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 63
End posion on genome 147
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
ttgtaatcat
tRNA gene sequence 
GCCGAAGTGGCGGAACTGGCAGACGCGCTAGCTTCAGGAGCTAGTTCCCGTTAGGGAGTG
GAGGTTCGAGTCCTCTCTTCGGCACtt
Downstream region at tRNA end position 
tttaatgaac
Secondary structure (Cloverleaf model)
>SRA1005280	Leu	CAG
                   t      ACtt tttaatgaac
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     T C T C C     A
      C A A        G      + | | | |     G
    T       G G C G       G G A G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TTCCCGTTAGGGAGT
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  T       A
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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