The detailed information of tRNA gene sequence


Sequence ID>SRA1005286
Genome IDSRR006907.152493
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 108
End posion on genome 184
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
aagttttaat
tRNA gene sequence 
GCCGGTTTAGCTCAGTTGGCCAGAGCATCCGCCTTGTAAGCGGGAGGTCGTCAGTTCGAA
TCCGACAACCGGCACCA
Downstream region at tRNA end position 
agttttattg
Secondary structure (Cloverleaf model)
>SRA1005286	Thr	TGT
                   t      ACCA agttttattg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A
                     T - A          T A
                    T     C A G C C     A
      T G A        A      | | |   |     G
    T       C T C G       G T C A G     C
    G       | | | |                 T T
    G       G A G C
      C C A        A     AGGTC
                    T + G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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