The detailed information of tRNA gene sequence


Sequence ID>SRA1005327
Genome IDSRR006907.179481
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 55
End posion on genome 128
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
atatataaaA
tRNA gene sequence 
GGATCCTTAGCTCAGTGGTAGAGCAGCAGGCTGCAGTCCTGTAGGTCATTGGTTCAAATC
CGATAGGGTCCTGaa
Downstream region at tRNA end position 
gaagaaaata
Secondary structure (Cloverleaf model)
>SRA1005327	Cys	GCA
                   A      TGaa gaagaaaata
                     G - C
                     G - C
                     A - T
                     T + G
                     C - G
                     C - G
                     T - A          T A
                    T     T A G C C     A
        G A        A      | | + | |     A
      T     C T C G       A T T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    G + T
                    C - G
                    A - T
                    G - C
                    G - C
                  C       T
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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