The detailed information of tRNA gene sequence


Sequence ID>SRA1005342
Genome IDSRR006907.190997
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 62
End posion on genome 146
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
ttgtaatcat
tRNA gene sequence 
GCCGAAGTGGCGGAACTGGCAGACGCGCTAGCTTCAGGAGCTAGTTCCCGTTAGGGAGTG
GAGGTTCGAGTCCTCTCTTCGGCACtt
Downstream region at tRNA end position 
tttaatgaac
Secondary structure (Cloverleaf model)
>SRA1005342	Leu	CAG
                   t      ACtt tttaatgaac
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     T C T C C     A
      C A A        G      + | | | |     G
    T       G G C G       G G A G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TTCCCGTTAGGGAGT
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  T       A
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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