The detailed information of tRNA gene sequence


Sequence ID>SRA1005343
Genome IDSRR006907.191362
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 105
End posion on genome 176
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gtgtctctaa
tRNA gene sequence 
GGGCGATTAGCTCAGCGGTAGAGCACCTCGTTTACACCGAGATTGTCGGCGGTTCGATCC
CGTCATTGCCCAtgt
Downstream region at tRNA end position 
taggatttga
Secondary structure (Cloverleaf model)
>SRA1005343	Val	TAC
                   a      Atgt taggatttga
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     A - T
                     T - A          C T
                    T     C T G C C     A
        G A        A      | + | | |     G
      C     C T C G       G G C G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TTGTC
                    C   A
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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