The detailed information of tRNA gene sequence


Sequence ID>SRA1005350
Genome IDSRR006907.196256
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 135
End posion on genome 60
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position
attaaaatat
tRNA gene sequence
CTAGGTGTAGCTCAATAGGTAGAGCATCCGCTTTGGGAGCGGAAGGTTGTTGGTTCAAGT
CCAGCTACCTAGACCA
Downstream region at tRNA end position
attcaaggag
Secondary structure (Cloverleaf model)
>SRA1005350	Pro	TGG
                   t      ACCA attcaaggag
                     C - G
                     T - A
                     A - T
                     G - C
                     G - C
                     T - A
                     G + T          T G
                    T     C G A C C     A
      T A A        A      | + | | |     A
    A       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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