The detailed information of tRNA gene sequence


Sequence ID>SRA1005381
Genome IDSRR006907.227323
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 43
End posion on genome 126
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcatttactt
tRNA gene sequence 
ACGTCAGTGGCCGAGTGGTTTAGGCAACGGTCTCCAAAACCGTGAACATGTTCTACGAGG
GTTCGAATCCTTCCTGACGTGCAA
Downstream region at tRNA end position 
ttataatggt
Secondary structure (Cloverleaf model)
>SRA1005381	Trp	CCA
                   t      GCAA ttataatggt
                     A - T
                     C - G
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C          T A
                    T     C T T C C     A
      T G A        G      | | + | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T T          A     GAACATGTTCTAC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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