The detailed information of tRNA gene sequence


Sequence ID>SRA1005383
Genome IDSRR006907.230178
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 170
End posion on genome 83
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tatttgcaac
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGATTGCGGCGGTCTTGAAAACCGTTGAAGGGCAACCTTCC
CAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
gatttatctg
Secondary structure (Cloverleaf model)
>SRA1005383	Ser	TGA
                   c      GCCA gatttatctg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       C A G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGAAGGGCAACCTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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