The detailed information of tRNA gene sequence


Sequence ID>SRA1005417
Genome IDSRR013519.8116
Search identical group
Phylum/ClassViral metagenome of the Antarctic Lake Limnopolar in spring and summer? (SRP000593)
Species
Start position on genome 202
End posion on genome 128
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tatcttacgc
tRNA gene sequence 
GCACCTATAGCTCAGTTGGTCAGAGCAGCGAACTCATAATTCGTCGGTCCTAGGTTCAAG
TCCTAGTGGGTGCACtt
Downstream region at tRNA end position 
agcgtttaaa
Secondary structure (Cloverleaf model)
>SRA1005417	Met	CAT
                   c      ACtt agcgtttaaa
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G A T C C     A
      T G A        A      | | | | |     A
    T       C T C G       C T A G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     CGGTC
                    G + T
                    C - G
                    G - C
                    A - T
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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