The detailed information of tRNA gene sequence


Sequence ID>SRA1005429
Genome IDSRR013521.2173
Search identical group
Phylum/ClassViral metagenome of the Antarctic Lake Limnopolar in spring and summer? (SRP000593)
Species
Start position on genome 169
End posion on genome 95
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tcgcgcatcT
tRNA gene sequence 
GGTTCGTTAGCTCAGTGGTTAGAGCGTCTCCTTTACACGGAGAAGGTCGCAGGTTCGGTT
CCTGCACGAATCATtc
Downstream region at tRNA end position 
ccggagatag
Secondary structure (Cloverleaf model)
>SRA1005429	Val	TAC
                   T      ATtc ccggagatag
                     G - C
                     G + T
                     T - A
                     T - A
                     C - G
                     G - C
                     T - A          T T
                    T     C G T C C     G
      T G A        A      | | | | |     G
    G       C T C G       G C A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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