The detailed information of tRNA gene sequence


Sequence ID>SRA1005459
Genome IDSRR014584.37845
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 257
End posion on genome 182
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggttgcacac
tRNA gene sequence 
AGCACGATGGAGAAGCGGTCATCTCGCTGGGCTCATAACCCGGAGGTCGCAGGTTCGAAT
CCTGCTCGTGCCACGA
Downstream region at tRNA end position 
acttttcatg
Secondary structure (Cloverleaf model)
>SRA1005459	Met	CAT
                   c      ACGA acttttcatg
                     A   C
                     G - C
                     C - G
                     A - T
                     C - G
                     G - C
                     A - T          T A
                    T     C G T C C     A
      C G A        G      | | | | |     G
    G       A G A G       G C A G G     C
    G       | | | |                 T T
    T       T C T C
      C A          G     AGGTC
                    C - G
                    T + G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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