The detailed information of tRNA gene sequence


Sequence ID>SRA1005469
Genome IDSRR014584.48477
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 125
End posion on genome 35
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgatatacaa
tRNA gene sequence 
GGTTAGGTGGCCGAGTGGCTTATGGCAGCGCTCTTGAAAAGCGAAGTACGTTAATAGCGT
ACCGTGGGTTCAAATCCTACCCTAACCGCCA
Downstream region at tRNA end position 
aaatatagac
Secondary structure (Cloverleaf model)
>SRA1005469	Ser	TGA
                   a      GCCA aaatatagac
                     G - C
                     G - C
                     T - A
                     T - A
                     A - T
                     G - C
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | + | |     A
    G       G C C G       G T G G G     C
    G       + | | |                 T T
    C       T G G C
      T T A        A     AGTACGTTAATAGCGTACC
                    G   A
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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