The detailed information of tRNA gene sequence


Sequence ID>SRA1005544
Genome IDSRR014584.170454
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 263
End posion on genome 188
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttaaggtat
tRNA gene sequence 
TGCGGGATAGAGCAGTGGTTAGCTCGGTAGATTCATAATCTACAGGTCGGGGGTTCGAGT
CCCTCTCCCGCTACAA
Downstream region at tRNA end position 
atcttaatga
Secondary structure (Cloverleaf model)
>SRA1005544	Met	CAT
                   t      ACAA atcttaatga
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    G       C G A G       G G G G G     C
    G       | | | |                 T T
    T       G C T C
      T A          G     AGGTC
                    G - C
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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