The detailed information of tRNA gene sequence


Sequence ID>SRA1005549
Genome IDSRR014584.176013
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 46
End posion on genome 119
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
agagatttat
tRNA gene sequence
GGGCGAGTAGTGTAATGGTAACACTAGGGATTCCAAACCCCTCATTCTTGGTTCAAGTCC
AAGCTCCTCCGCAA
Downstream region at tRNA end position
gtattgttct
Secondary structure (Cloverleaf model)
>SRA1005549	Trp	CCA
                   t      GCAA gtattgttct
                     G - C
                     G - C
                     G + T
                     C   C
                     G - C
                     A - T
                     G - C          T G
                    T     G A A C C     A
        A A        A      | | | | |     A
      T     T G T G       C T T G G     C
      G     | | | |                 T T
      G     A C A C
        T A        T     CATT
                    A - T
                    G - C
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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