The detailed information of tRNA gene sequence


Sequence ID>SRA1005551
Genome IDSRR014584.178358
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 204
End posion on genome 128
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gggggcaaac
tRNA gene sequence 
AGCGGGGTAGTTCAGATGGTAAGAACGCCTGACTCATAATCAGGAGGTCGCAGGTTCGAT
ACCTGCCCCCGCAACAA
Downstream region at tRNA end position 
attaattttt
Secondary structure (Cloverleaf model)
>SRA1005551	Met	CAT
                   c      ACAA attaattttt
                     A   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          A T
                    T     C G T C C     A
      A G A        A      | | | | |     G
    T       C T T G       G C A G G     C
    G       | | | |                 T T
    G       G A A C
      T A A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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