The detailed information of tRNA gene sequence


Sequence ID>SRA1005609
Genome IDSRR014584.242004
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 215
End posion on genome 141
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attgatacaT
tRNA gene sequence 
CGCTAATTAGTTAAATGGTTTAACAATTCTCTTGAAAAGAATGAAAGTGGGTTCAATTCC
CACATCAGCAAACA
Downstream region at tRNA end position 
taaacaattt
Secondary structure (Cloverleaf model)
>SRA1005609	Ser	TGA
                   T      AACA taaacaattt
                     C   A
                     G - C
                     C - G
                     T - A
                     A   C
                     A - T
                     T - A          T T
                    T     C A C C C     A
        A A        A      | | | | |     A
      T     A T T G       G T G G G     C
      G     | | | |                 T T
      G     T A A C
        T T        A     GAAA
                    A - T
                    T - A
                    T - A
                    C - G
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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