The detailed information of tRNA gene sequence


Sequence ID>SRA1005645
Genome IDSRR014586.54770
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 74
End posion on genome 151
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acaatgaaaa
tRNA gene sequence 
CGCGCTGTGGAGTAGTCAGGCTAACTCGTCAGGCTCATAACCTGAAGGTCGCCGGTTCAA
ATCCGGCTGGCGCAACCA
Downstream region at tRNA end position 
gatacacccc
Secondary structure (Cloverleaf model)
>SRA1005645	Met	CAT
                   a      ACCA gatacacccc
                     C   A
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     G + T          T A
                    T     C G G C C     A
    C T G A        G      | | | | |     A
  A         T G A G       G C C G G     C
  G         | | | |                 T T
  G         A C T C
    C T A          G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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