The detailed information of tRNA gene sequence


Sequence ID>SRA1005667
Genome IDSRR014586.113245
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 60
End posion on genome 133
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgcttgatat
tRNA gene sequence 
TGCGGGGTGGAGCAGCGGGCAGCTCGCCAGGCTCATAACCTGGAGGTCACTGGTTCAATT
CCAGTCTCCGCAACac
Downstream region at tRNA end position 
gtctaggccg
Secondary structure (Cloverleaf model)
>SRA1005667	Met	CAT
                   t      ACac gtctaggccg
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C          T T
                    T     T G A C C     A
      C G A        G      | | | | |     A
    G       C G A G       A C T G G     C
    G       | | | |                 T T
    G       G C T C
      C A          G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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