The detailed information of tRNA gene sequence


Sequence ID>SRA1005675
Genome IDSRR014586.118300
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 177
End posion on genome 100
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttcgacatca
tRNA gene sequence 
CGGGGAGTAGTGTAGCTTGGTTAACACGTCGGTTTTGGGAACCGAAGGGCGTGGGTTCAA
ATCCCACCTCTCCGACCA
Downstream region at tRNA end position 
taatttttgg
Secondary structure (Cloverleaf model)
>SRA1005675	Pro	TGG
                   a      ACCA taatttttgg
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
    T C G A        A      | | | | |     A
  T         T G T G       G T G G G     C
  G         | | | |                 T T
  G         A C A C
    T T A          G     AGGGC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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