The detailed information of tRNA gene sequence


Sequence ID>SRA1005696
Genome IDSRR014586.148795
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 145
End posion on genome 69
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgatttttgc
tRNA gene sequence 
CGCATCGGAGTGGAACGGATAACCATGTTTGGCTCATATCCAAACGATAGCGGGTTCGAC
TCCCGCCGGTGCAACCA
Downstream region at tRNA end position 
agttagctag
Secondary structure (Cloverleaf model)
>SRA1005696	Met	CAT
                   c      ACCA agttagctag
                     C   A
                     G - C
                     C - G
                     A - T
                     T + G
                     C - G
                     G - C          T C
                    G     C G C C C     A
      C A A        A      | | | | |     G
    G       G G T G       G C G G G     C
    G       | | | +                 T T
    A       C C A T
      T A A        G     CGATA
                    T - A
                    T - A
                    T - A
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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