The detailed information of tRNA gene sequence


Sequence ID>SRA1005706
Genome IDSRR014586.166120
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 116
End posion on genome 26
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
aagaattaaa
tRNA gene sequence 
GGATGTTTGACCGGAGCGGCAATCGGCGGAGACTGTAAATCTCCTGGTACAGAAATGGCC
TTCGTAGGTTCGAGTCCTACAGCATCCACCA
Downstream region at tRNA end position 
gtataaaaga
Secondary structure (Cloverleaf model)
>SRA1005706	Tyr	GTA
                   a      ACCA gtataaaaga
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     T + G
                     T - A          T G
                    T     C A T C C     A
      G A G        G      | | | | |     G
    C       G C C A       G T A G G     C
    G       +   |                   T T
    G       T C G G
      C A A        C     TGGTACAGAAATGGCCTTC
                    G - C
                    G - C
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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