The detailed information of tRNA gene sequence


Sequence ID>SRA1005711
Genome IDSRR014586.171766
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 82
End posion on genome 158
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgatttttgc
tRNA gene sequence 
CGCATCGGAGTGGAACGGATAACCATGTTTGGCTCATATCCAAACGATAGCGGGTTCGAC
TCCCGCCGGTGCAACCA
Downstream region at tRNA end position 
agttagctag
Secondary structure (Cloverleaf model)
>SRA1005711	Met	CAT
                   c      ACCA agttagctag
                     C   A
                     G - C
                     C - G
                     A - T
                     T + G
                     C - G
                     G - C          T C
                    G     C G C C C     A
      C A A        A      | | | | |     G
    G       G G T G       G C G G G     C
    G       | | | +                 T T
    A       C C A T
      T A A        G     CGATA
                    T - A
                    T - A
                    T - A
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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