The detailed information of tRNA gene sequence


Sequence ID>SRA1005719
Genome IDSRR014586.196875
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 126
End posion on genome 52
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ctccaaccat
tRNA gene sequence 
GGGCGAATAGTGATAGTGGTAGCACACTGCACTTGCAATGCAGTAGTCTGAGTTCGATTC
TCAGTTTGTCCACCA
Downstream region at tRNA end position 
agtaccggaa
Secondary structure (Cloverleaf model)
>SRA1005719	Ala	TGC
                   t      ACCA agtaccggaa
                     G - C
                     G - C
                     G + T
                     C - G
                     G + T
                     A - T
                     A - T          T T
                    T     G A C T C     A
      G A T        A      | | | | |     G
    T       A G T G       C T G A G     C
    G         | | |                 T T
    G       G C A C
      T A          A     TAGT
                    C - G
                    T - A
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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