The detailed information of tRNA gene sequence


Sequence ID>SRA1005746
Genome IDSRR014586.244681
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 184
End posion on genome 108
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaaaggtaT
tRNA gene sequence 
CGCGAGATGGAGCAGTCGGTAGCTCGGTAGACTCATACTCTACAGGTCGCGGGTTCGAGT
CCCGCTCTCGCAAACA
Downstream region at tRNA end position 
aaatttgaga
Secondary structure (Cloverleaf model)
>SRA1005746	Met	CAT
                   T      AACA aaatttgaga
                     C   A
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T G
                    T     C G C C C     A
      T G A        G      | | | | |     G
    C       C G A G       G C G G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    G - C
                    T - A
                    A - T
                    G - C
                    A - T
                  C       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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