The detailed information of tRNA gene sequence


Sequence ID>SRA1005785
Genome IDSRR014587.109035
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 190
End posion on genome 114
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
aaacttacaa
tRNA gene sequence 
GGGCCTATAGCTAAATTGGATAAAGCATCGGATTTCTATTCCGACGATTGGGGGTTCGAA
TCCCTCTGGGCTCGCCA
Downstream region at tRNA end position 
tctatttatt
Secondary structure (Cloverleaf model)
>SRA1005785	Arg	TCT
                   a      GCCA tctatttatt
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T A
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       A T C G       G G G G G     C
    G         | | |                 T T
    G       A A G C
      A T A        A     CGATT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       T
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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