The detailed information of tRNA gene sequence


Sequence ID>SRA1005793
Genome IDSRR014587.155613
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 143
End posion on genome 67
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ggcaccatct
tRNA gene sequence 
GGAGCGGTAGTTCAGTTGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
CCCCGTCCGCTCCGCCA
Downstream region at tRNA end position 
gaattaaaat
Secondary structure (Cloverleaf model)
>SRA1005793	Asp	GTC
                   t      GCCA gaattaaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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