The detailed information of tRNA gene sequence


Sequence ID>SRA1005796
Genome IDSRR014587.160395
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 41
End posion on genome 115
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
caccagcaac
tRNA gene sequence 
GGGCGGTTGGCGCAGTGGTAGCGCACTTCGTTCACACCGAAGGGGTCGCGGGTTCGAACC
CCGCATCGCCCACCG
Downstream region at tRNA end position 
acattgtcgg
Secondary structure (Cloverleaf model)
>SRA1005796	Val	CAC
                   c      ACCG acattgtcgg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G + T
                     T - A          C A
                    T     C G C C C     A
        G A        G      | | | | |     G
      T     C G C G       G C G G G     C
      G     | | | |                 T T
      G     G C G C
        T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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