The detailed information of tRNA gene sequence


Sequence ID>SRA1005802
Genome IDSRR014587.178953
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 160
End posion on genome 87
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
taaatgaaat
tRNA gene sequence 
GGCTGGGTAGCACAGTGGCCATGCATCGGATTGCAAATCCGCGGACGCCGGTTCGATTCC
GGCCTCAGCCTCCA
Downstream region at tRNA end position 
ttttcatttt
Secondary structure (Cloverleaf model)
>SRA1005802	Cys	GCA
                   t      TCCA ttttcatttt
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C
                     G + T
                     G - C          T T
                    T     C G G C C     A
        G A        A      | | | | |     G
      T     C A C G       G C C G G     C
      G       | | |                 T T
      G     A T G C
        C C        A     GGAC
                    T   C
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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