The detailed information of tRNA gene sequence


Sequence ID>SRA1005830
Genome IDSRR014587.253382
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 70
End posion on genome 143
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
agtctcctcg
tRNA gene sequence 
GGCGAGGTAGCAAAGCGGTTATGCAGCGGCCTGCAAAGCCGTCTAGACGGGTTCGACTCC
CGTCCTCGCCTCCA
Downstream region at tRNA end position 
aattccccag
Secondary structure (Cloverleaf model)
>SRA1005830	Cys	GCA
                   g      TCCA aattccccag
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T C
                    T     T G C C C     A
        G A        A      | | | | |     G
      C     A A C G       A C G G G     C
      G       | | |                 T T
      G     A T G C
        T T        A     CTAG
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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