The detailed information of tRNA gene sequence


Sequence ID>SRA1005885
Genome IDSRR014589.12948
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 161
End posion on genome 85
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tacacagtgt
tRNA gene sequence 
GGAGCTGTGGTGTAGTGGCCTATCATGCCTGCCTGTCACGCAGGAGACCGCGGGTTCGAA
TCCCGTCAGCTCCGCCA
Downstream region at tRNA end position 
ttttttcaaa
Secondary structure (Cloverleaf model)
>SRA1005885	Asp	GTC
                   t      GCCA ttttttcaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T G C C C     A
      T G A        G      + | | | |     G
    G       T G T G       G C G G G     C
    G         | | +                 T T
    C       T C A T
      C T A        G     AGACC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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