The detailed information of tRNA gene sequence


Sequence ID>W1810445569
Genome IDPZKN01000022
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfonatronum sp. SC1 [PZKN]
Start position on genome 69874
End posion on genome 69781
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
catgagtcgg
tRNA gene sequence 
GGAAGCGTTTCGTCACCGGTGTGGCGCCTGGACTTCAAATCCAGTGGACGGTCGAGAGGT
CGTCGGTAGGTTCGACTCCTATACGCTTCCGCCA
Downstream region at tRNA end position 
tttcctcgtc
Secondary structure (Cloverleaf model)
>W1810445569	Sec	TCA
                   g      GCCA tttcctcgtc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    T     T A T C C     A
      C C A        T      + | | | |     G
    G       C T G C       G T A G G     C
    G       | + | |                 T T
    T       G G C G
      G T          C     TGGACGGTCGAGAGGTCGTCG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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