The detailed information of tRNA gene sequence


Sequence ID>SRA1005979
Genome IDSRR014589.87901
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 224
End posion on genome 135
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
ataaatacaT
tRNA gene sequence
GGAGAAGTGTCCGAGCGGCCGAAGGAGCACGATTGGAAATCGTGTAGGCGTCACAAGCGT
CTCGAGGGTTCGAATCCCTCCTTCTCCGTtt
Downstream region at tRNA end position
ctttagataa
Secondary structure (Cloverleaf model)
>SRA1005979	Ser	GGA
                   T      GTtt ctttagataa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TAGGCGTCACAAGCGTCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK