The detailed information of tRNA gene sequence


Sequence ID>SRA1005981
Genome IDSRR014589.88914
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 272
End posion on genome 181
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
agataaattT
tRNA gene sequence
GGAGAGATACCCAAGTGGCTATAAGGGGACCCTCTGCTAAGGGGTTAGACTGCGTAAGTG
GTGCGAGGGTTCGAATCCCTCTCTCTCCGTCg
Downstream region at tRNA end position
gtaaattttt
Secondary structure (Cloverleaf model)
>SRA1005981	Ser	GCT
                   T      GTCg gtaaattttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    G T G A        A      | | | | |     G
  G         A C C C       G A G G G     C
  C           | | |                 T T
  T         A G G G
    A T A          G     TAGACTGCGTAAGTGGTGC
                    A - T
                    C - G
                    C - G
                    C - G
                    T + G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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