The detailed information of tRNA gene sequence


Sequence ID>SRA1005998
Genome IDSRR014589.97664
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 152
End posion on genome 60
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
agataaattT
tRNA gene sequence
GGAGAGATACCCAAGTGGCTATAAGGGGACCCTCTGCTAAGGGGGTTAGACTGCGTAAGT
GGTGCGAGGGTTCGAATCCCTCTCTCTCCGTCg
Downstream region at tRNA end position
gttaaatttt
Secondary structure (Cloverleaf model)
>SRA1005998	Ser	GCT
                   T      GTCg gttaaatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    G T G A        A      | | | | |     G
  G         A C C C       G A G G G     C
  C           | | |                 T T
  T         A G G G
    A T A          G     TTAGACTGCGTAAGTGGTGC
                    A   G
                    C - G
                    C - G
                    C - G
                    T + G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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