The detailed information of tRNA gene sequence


Sequence ID>SRA1006013
Genome IDSRR014589.108206
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 149
End posion on genome 238
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ataaatacaT
tRNA gene sequence 
GGAGAAGTGTCCGAGCGGCCGAAGGAGCACGATTGGAAATCGTGTAGGCGTCACAAGCGT
CTCGAGGGTTCGAATCCCTCCTTCTCCGTtt
Downstream region at tRNA end position 
cttagataaa
Secondary structure (Cloverleaf model)
>SRA1006013	Ser	GGA
                   T      GTtt cttagataaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TAGGCGTCACAAGCGTCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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