The detailed information of tRNA gene sequence


Sequence ID>SRA1006134
Genome IDSRR016610.36786
Search identical group
Phylum/ClassMetagenomic analysis of deep-sea hydrothermal vent prokaryotes (SRP000749)
Species
Start position on genome 52
End posion on genome 128
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
cgcagacgtg
tRNA gene sequence 
GTGATCGTAGCTCAGTCTGGTTAGAGCGCCTGGTTGTGGTCCAGGAGGTCGCGGGTTCAA
ATCCCGTCGGTCACCCAa
Downstream region at tRNA end position 
aatttaagga
Secondary structure (Cloverleaf model)
>SRA1006134	His	GTG
                   g      CCAa aatttaagga
                     G - C
                     T - A
                     G - C
                     A - T
                     T + G
                     C - G
                     G - C          T A
                    T     T G C C C     A
    C T G A        A      + | | | |     A
  T         C T C G       G C G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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