The detailed information of tRNA gene sequence


Sequence ID>SRA1006138
Genome IDSRR016610.44136
Search identical group
Phylum/ClassMetagenomic analysis of deep-sea hydrothermal vent prokaryotes (SRP000749)
Species
Start position on genome 141
End posion on genome 57
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position
ggtccttcgt
tRNA gene sequence
GCGGGCGTGGCGGAATTGGTAGACGCAGCAGGTTTAGGTCCTGCCATCGCAAGATGTGGG
GGTTCGAGTCCCTTCGCCCGCACCA
Downstream region at tRNA end position
gtcccgccgc
Secondary structure (Cloverleaf model)
>SRA1006138	Leu	TAG
                   t      ACCA gtcccgccgc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T T C C C     A
      T A A        G      + + | | |     G
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CATCGCAAGATGT
                    G - C
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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