The detailed information of tRNA gene sequence


Sequence ID>SRA1006141
Genome IDSRR016610.51063
Search identical group
Phylum/ClassMetagenomic analysis of deep-sea hydrothermal vent prokaryotes (SRP000749)
Species
Start position on genome 177
End posion on genome 252
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
tgagttttac
tRNA gene sequence 
GGGCCGTTAGCTCAGTTGGTAGAGCAGTTGACTCTTAATCAATAGGTCCAAGGTTCGAAT
CCTTGACGGCCCACCA
Downstream region at tRNA end position 
agacagaagn
Secondary structure (Cloverleaf model)
>SRA1006141	Lys	CTT
                   c      ACCA agacagaagn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     G T T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C A A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G + T
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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