The detailed information of tRNA gene sequence


Sequence ID>SRA1006149
Genome IDSRR016610.80669
Search identical group
Phylum/ClassMetagenomic analysis of deep-sea hydrothermal vent prokaryotes (SRP000749)
Species
Start position on genome 92
End posion on genome 175
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
gtccgttcgt
tRNA gene sequence 
GCGGGCGTGGCGGAATTGGTAGACGCAGCAGGTTTAGGTCCTGCCATCGCAAGATGTGGG
GTTCGAGTCCCTTCGCCCGCACCA
Downstream region at tRNA end position 
gtcccgccgn
Secondary structure (Cloverleaf model)
>SRA1006149	Leu	TAG
                   t      ACCA gtcccgccgn
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T T C C C     A
      T A A        G        + | | |     G
    T       G G C G       T G G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CATCGCAAGATG
                    G - C
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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