The detailed information of tRNA gene sequence


Sequence ID>SRA1006179
Genome IDSRR016610.156012
Search identical group
Phylum/ClassMetagenomic analysis of deep-sea hydrothermal vent prokaryotes (SRP000749)
Species
Start position on genome 97
End posion on genome 22
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ttcgtgcttc
tRNA gene sequence 
GCCGGTTTAGCTCAGTTGGTAGAGCACCCGCCTTGTAAGCGGTAGGTCGTCAGTTCGAAT
CCGACAACCGGCACCA
Downstream region at tRNA end position 
aaggtctcct
Secondary structure (Cloverleaf model)
>SRA1006179	Thr	TGT
                   c      ACCA aaggtctcct
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A
                     T - A          T A
                    T     C A G C C     A
      T G A        A      | | |   |     G
    T       C T C G       G T C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    C   T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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