The detailed information of tRNA gene sequence


Sequence ID>SRA1006180
Genome IDSRR016610.156072
Search identical group
Phylum/ClassMetagenomic analysis of deep-sea hydrothermal vent prokaryotes (SRP000749)
Species
Start position on genome 29
End posion on genome 105
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position
agccttcgcg
tRNA gene sequence
GCGACCGTAGTTCAATTGGTTAGAGTGCCGGCTTGTGATGCCGGAAGTTGCGGGTTCAAG
TCCCGTCGGTCGCCCCA
Downstream region at tRNA end position
taattttcgg
Secondary structure (Cloverleaf model)
>SRA1006180	His	GTG
                   g      CCCA taattttcgg
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T A A        A      + | | | |     A
    T       C T T G       G C G G G     C
    G       | | + +                 T T
    G       G A G T
      T T A        G     AAGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       T
                  T       A
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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