The detailed information of tRNA gene sequence


Sequence ID>SRA1006215
Genome IDSRR016610.299643
Search identical group
Phylum/ClassMetagenomic analysis of deep-sea hydrothermal vent prokaryotes (SRP000749)
Species
Start position on genome 7
End posion on genome 91
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position
nnnncttcgt
tRNA gene sequence
GCGGGCGTGGCGGAATTGGTAGACGCAGCAGGTTTAGGTCCTGCCATCGCAAGATGTGGG
GGTTCGAGTCCCTTCGCCCGCACCA
Downstream region at tRNA end position
gtcccgccgc
Secondary structure (Cloverleaf model)
>SRA1006215	Leu	TAG
                   t      ACCA gtcccgccgc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T T C C C     A
      T A A        G      + + | | |     G
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CATCGCAAGATGT
                    G - C
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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