The detailed information of tRNA gene sequence


Sequence ID>SRA1006233
Genome IDSRR020488.6454
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 107
End posion on genome 183
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
tcgatttttt
tRNA gene sequence
GGCTATGTAGCTCAGCTGGTTAGAGCGCAGCATTCATAATGCTGAGGTCGGTAGTTCAAG
TCTACCCATAGCCACCA
Downstream region at tRNA end position
tagaaatatt
Secondary structure (Cloverleaf model)
>SRA1006233	Met	CAT
                   t      ACCA tagaaatatt
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     T - A
                     G - C          T G
                    T     C C A T C     A
      C G A        A      | | | | |     A
    T       C T C G       G G T A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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