The detailed information of tRNA gene sequence


Sequence ID>SRA1006234
Genome IDSRR020488.6844
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 87
End posion on genome 10
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ccttacgttt
tRNA gene sequence 
GGGCTTGTAGCTCAGTCTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTAGTTCGA
GTCTACCCAGGCCCACCA
Downstream region at tRNA end position 
tgacgtggtn
Secondary structure (Cloverleaf model)
>SRA1006234	Ile	GAT
                   t      ACCA tgacgtggtn
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T G
                    T     C C A T C     A
    C T G A        A      | | | | |     G
  T         C T C G       G G T A G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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